{"id":35783,"date":"2026-05-18T14:10:39","date_gmt":"2026-05-18T04:10:39","guid":{"rendered":"https:\/\/naturalhorseworld.com\/stage\/?p=35783"},"modified":"2026-05-25T15:53:56","modified_gmt":"2026-05-25T05:53:56","slug":"how-to-take-fecal-egg-counts","status":"publish","type":"post","link":"https:\/\/naturalhorseworld.com\/stage\/how-to-take-fecal-egg-counts\/","title":{"rendered":"How to take Fecal Egg Counts"},"content":{"rendered":"<h1><span style=\"font-size: 18pt;\">How to Know What&#8217;s Actually Going on Inside Your Horse \u2014 The Fecal Egg Count Explained<\/span><\/h1>\n<p>In my last post I talked about worming horses out of habit \u2014 and why that calendar-based approach is something we really need to move away from. I promised to follow up with the *how* \u2014 specifically, how you actually measure what&#8217;s going on with your horse&#8217;s worm burden. That&#8217;s where the Fecal Egg Count (FEC) comes in.<\/p>\n<p>If you haven&#8217;t heard of one before, don&#8217;t worry. By the end of this post, you&#8217;ll know exactly what it is, how it&#8217;s done, and how to get one \u2014 whether you want someone else to handle it or you&#8217;d like to give it a go yourself.<\/p>\n<p>Fecal egg counts aren\u2019t perfect for estimating worm burden, but they\u2019re the best tool we have right now for monitoring egg shedding on pasture and are an important part of parasite management. The only way to truly know a horse\u2019s total worm load is to look inside and that can only happen with an autopsy.<\/p>\n<h2>What Is a Fecal Egg Count?<\/h2>\n<p><img title=\"How to take Fecal Egg Counts - Natural Horse World\" fetchpriority=\"high\" decoding=\"async\" class=\"alignright size-medium wp-image-35786\" src=\"https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECTesting-251x400.jpg\" alt=\"\" width=\"251\" height=\"400\" srcset=\"https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECTesting-251x400.jpg 251w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECTesting-502x800.jpg 502w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECTesting-768x1225.jpg 768w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECTesting-963x1536.jpg 963w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECTesting-1284x2048.jpg 1284w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECTesting-500x797.jpg 500w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECTesting-scaled.jpg 1605w\" sizes=\"(max-width: 251px) 100vw, 251px\" \/>A Fecal Egg Count \u2014 also written as FEC or sometimes called a Worm Egg Count (WEC) \u2014 is exactly what it sounds like. A fresh sample of your horse&#8217;s manure is examined under a microscope to count the number of worm eggs present per gram of faeces. That number, called the EPG (eggs per gram), tells you how many eggs the adult worms living in your horse&#8217;s gut are shedding at that point in time.<\/p>\n<p>It&#8217;s a simple, non-invasive test that gives you actual data. Instead of guessing whether your horse may need worming, you have much better information to base decisions on.<\/p>\n<p>Why:<\/p>\n<ul>\n<li>FECs mainly detect egg-laying adult worms. They do not reliably detect:<\/li>\n<li>encysted small strongyle larvae<\/li>\n<li>tapeworm burden<\/li>\n<li>migrating larval stages<\/li>\n<li>A horse can still have parasite issues with a low egg count.<\/li>\n<\/ul>\n<h3>Why Does This Matter?<\/h3>\n<p>Here&#8217;s something that surprises a lot of people: not all horses shed the same number of worm eggs, even when kept in the same paddock. Research consistently shows that around 20% of horses are responsible for roughly 80% of the worm egg contamination on pasture. These are what we call &#8220;high shedders.&#8221;<br \/>\nInterestingly, horses often remain consistently low or high shedders over time, although this can change as they age which is why repeat testing can be so useful.<\/p>\n<p>The rest of your herd \u2014 the majority \u2014 are likely low shedders. Their immune systems manage the worm burden well, and they may not need worming nearly as often as we&#8217;ve traditionally assumed.<\/p>\n<p>There&#8217;s also an interesting layer to this. The most common internal parasite in horses is the small strongyle (cyathostomins), and over 95% of horses will have them. Larvae ingested from pasture can go dormant inside the gut wall \u2014 a process called hypobiosis \u2014 and some researchers believe adult worm populations may play a role in regulating larval emergence and parasite balance within the gut.<\/p>\n<p>When you remove the adult worms with a chemical wormer, it can disrupt that balance. There\u2019s also growing discussion around how frequent deworming may influence the gut ecosystem and parasite balance. Some studies have found associations between deworming history, parasite management practices, and colic risk \u2014 though this is a complex area and not fully understood. The takeaway isn\u2019t \u201cnever worm,\u201d but rather to avoid unnecessary treatments and use evidence-based parasite management.<\/p>\n<p>An FEC gives you that evidence.<\/p>\n<h3>What the Numbers Mean<\/h3>\n<p>Different labs may use slightly different reference points, but a general guide for adult horses:<\/p>\n<p>&#8211; Low shedder: under 200 EPG \u2014 may not need treatment<br \/>\n&#8211; Moderate shedder: 200\u2013500 EPG \u2014 monitor closely, treatment may be warranted<br \/>\n&#8211; High shedder: over 500 EPG \u2014 treatment recommended<br \/>\nThresholds can vary slightly between countries, laboratories, and individual parasite management programs.<\/p>\n<p>Your vet, or whoever processes your FEC, can advise on what thresholds to use based on your horse&#8217;s age, health status, and history. Geriatric horses, and horses in poor condition are generally treated more conservatively, while young horses under 3 need more frequent targeted treatments.<\/p>\n<h3>What an FEC Doesn\u2019t Detect Well<\/h3>\n<p>FECs are extremely useful, but they do have limitations. Standard egg counts mainly measure egg-laying adult strongyles and roundworms. They do not reliably detect:<\/p>\n<ul>\n<li>encysted small strongyle larvae<\/li>\n<li>tapeworm burden<\/li>\n<li>bots<\/li>\n<li>very early infections<\/li>\n<\/ul>\n<p>That\u2019s why FECs work best as part of an overall parasite management plan rather than a standalone answer to every worming decision.<\/p>\n<h3>Option 1: Send a Sample to a Lab<\/h3>\n<p>This is the most straightforward option for most horse owners. You collect a fresh manure sample (usually around 5\u201310 grams \u2014 about a large tablespoon) in a sealed container and send it off to be processed. Results are typically returned by email within a few days.<\/p>\n<p>A number of services offer this across Australia so when posting samples ideally choose one that&#8217;s closest, so the samples arrive quickly or use Express post &#8211; here are some I know of:<\/p>\n<p>&#8211; <a href=\"https:\/\/www.malsequine.com.au\/\" target=\"_blank\" rel=\"noopener\">Mal&#8217;s Equine Worm Egg Counts<\/a> \u2014 Tasmania-based, with detailed educational resources and downloadable guides at their <a href=\"https:\/\/www.malsequine.com.au\/educational-resources-1\" target=\"_blank\" rel=\"noopener\">educational resources page<\/a> and <a href=\"https:\/\/www.malsequine.com.au\/useful-files\" target=\"_blank\" rel=\"noopener\">useful files page<\/a> including FEC planners, property worming records, and a guide to horse wormers in Australia.<br \/>\n&#8211; <a href=\"https:\/\/www.wormcheckaustralia.com\/\" target=\"_blank\" rel=\"noopener\">WormCheck Australia<\/a> \u2014 VIC-based, offers in-store drop-offs and has a solid library of downloadable resources at <a href=\"https:\/\/www.wormcheckaustralia.com\/resources\" target=\"_blank\" rel=\"noopener\">wormcheckaustralia.com\/resources<\/a>, including guides for clubs, saddleries, and agistment properties.<br \/>\n&#8211; <a href=\"https:\/\/www.parasite.com.au\/\" target=\"_blank\" rel=\"noopener\">Parasite Australia<\/a> \u2014 Victoria-based and offering tests for varied species and discounts for larger numbers.<br \/>\n&#8211; <a href=\"https:\/\/www.facebook.com\/FECCanberra\/\" target=\"_blank\" rel=\"noopener\">FEC Canberra<\/a> \u2014 ACT\/NSW-based, find them on Facebook.<br \/>\n&#8211; <a href=\"https:\/\/eggscope.com.au\/about-us\" target=\"_blank\" rel=\"noopener\">Eggscope<\/a> \u2014 Brisbane-based.<\/p>\n<p>Many vets also offer this service in-house, and some rural\/agricultural produce stores around the country have added it to their services. It&#8217;s worth asking around locally.<\/p>\n<h3>Option 2: On-the-Spot Testing \u2014 The ParaSight System<\/h3>\n<p>If you&#8217;d rather get results immediately without posting a sample, the <a href=\"https:\/\/www.parasightaustralia.com.au\/\" target=\"_blank\" rel=\"noopener\">ParaSight System<\/a>\u00a0is an automated FEC testing unit available in Australia and New Zealand. It&#8217;s designed to give you accurate results on the spot.<\/p>\n<p>You can find your nearest ParaSight location at<a href=\"https:\/\/www.parasightaustralia.com.au\/placements\" target=\"_blank\" rel=\"noopener\"> parasightaustralia.com.au\/placements<\/a>. Some veterinary clinics and equine suppliers have these units available.<\/p>\n<h3>Option 3: Do It Yourself<\/h3>\n<p><img title=\"How to take Fecal Egg Counts - Natural Horse World\" decoding=\"async\" class=\"alignright size-medium wp-image-35787\" src=\"https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECtestMicroscope-249x400.jpg\" alt=\"Fecal Egg count microscope\" width=\"249\" height=\"400\" srcset=\"https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECtestMicroscope-249x400.jpg 249w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECtestMicroscope-498x800.jpg 498w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECtestMicroscope-768x1233.jpg 768w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECtestMicroscope-957x1536.jpg 957w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECtestMicroscope-1275x2048.jpg 1275w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECtestMicroscope-500x803.jpg 500w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/FECtestMicroscope.jpg 1370w\" sizes=\"(max-width: 249px) 100vw, 249px\" \/>Yes, you can perform your own Fecal Egg Counts. It takes a bit of setup and a learning curve, but once you&#8217;re across the technique it&#8217;s very achievable \u2014 and it makes ongoing monitoring much more affordable, especially if you have several horses.<\/p>\n<p>You&#8217;ll need a microscope capable of 100x magnification (with 40x and 100x views being most commonly used, a McMaster counting chamber (a special slide designed for this purpose), a flotation solution (typically made with salt or sugar), and a few other basic supplies.<\/p>\n<p>To get started, these short videos are a great introduction:<br \/>\n&#8211; <a href=\"https:\/\/youtu.be\/ZptZZ1jigxM?si=PD1zCYCnsRj8Ro4p\" target=\"_blank\" rel=\"noopener\">YouTube \u2014 FEC overview and method<\/a><br \/>\n&#8211; <a href=\"https:\/\/youtu.be\/HVW62c9C-vU?si=sxS3duKP_YalEn5D\" target=\"_blank\" rel=\"noopener\">YouTube \u2014 Step-by-step technique<\/a><\/p>\n<p>There are more in-depth training videos on YouTube too \u2014 just search &#8220;Fecal Egg Count horse&#8221; and you&#8217;ll find plenty of options.<\/p>\n<p>For written instructions: Microscopes Australia has a <a href=\"https:\/\/microscopes.com.au\/blogs\/news\/how-to-perform-a-faecal-worm-egg-count-with-a-microscope\" target=\"_blank\" rel=\"noopener\">detailed how-to guide<\/a> covering everything from sample preparation to reading the results.<\/p>\n<p><strong>For supplies:<\/strong> Look for starter kits from suppliers like <a href=\"https:\/\/vetlabsupplies.co.uk\/products\/parasitology\/parasitology-bespoke-starter-kits\/\" target=\"_blank\" rel=\"noopener\">VetLab Supplies,<\/a> which offer bespoke parasitology starter kits with everything you need. There are also Australian-based microscope suppliers worth exploring \u2014 <a href=\"https:\/\/microscopes.com.au\/\" target=\"_blank\" rel=\"noopener\">Microscopes Australia<\/a> has resources and equipment relevant to this.<\/p>\n<h3>How to Collect the Sample<\/h3>\n<p><img title=\"How to take Fecal Egg Counts - Natural Horse World\" decoding=\"async\" class=\"alignright size-medium wp-image-35822\" src=\"https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/ManureSample-400x321.jpg\" alt=\"Horse Manure sample\" width=\"400\" height=\"321\" srcset=\"https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/ManureSample-400x321.jpg 400w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/ManureSample-800x642.jpg 800w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/ManureSample-768x616.jpg 768w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/ManureSample-500x401.jpg 500w, https:\/\/naturalhorseworld.com\/stage\/wp-content\/uploads\/2026\/05\/ManureSample.jpg 861w\" sizes=\"(max-width: 400px) 100vw, 400px\" \/><\/p>\n<p>Regardless of which option you choose, the collection process is the same:<\/p>\n<p>1. Collect fresh manure \u2014 ideally from the middle of a fresh pile (the surface can dry out or become contaminated)<br \/>\n2. Use a clean container that seals air out \u2014 a small zip-lock bag works fine<br \/>\n3. Keep it cool and refrigerated if you&#8217;re not processing immediately<br \/>\n4. Aim to process or post within 24 hours of collection<\/p>\n<p>Full sample collection instructions for postal submission are at <a href=\"https:\/\/www.malsequine.com.au\/collection\" target=\"_blank\" rel=\"noopener\">malsequine.com.au\/collection.<\/a><\/p>\n<h3>The Bottom Line<\/h3>\n<p>An FEC is the difference between managing your horse&#8217;s parasite load intelligently and just hoping for the best. It takes the guesswork out of worming decisions, helps you identify your high shedders, and means your wormers are being used when they&#8217;ll actually make a difference \u2014 which also helps slow the development of resistance.<\/p>\n<p>You don&#8217;t need to be a vet or a scientist to do this. You just need a fresh sample and one of the options above.<\/p>\n<p>FECs can also be used before and after worming to check whether a product is actually working \u2014 something called a Fecal Egg Count Reduction Test (FECRT). This is becoming increasingly important as resistance to some wormers continues to grow.<\/p>\n<p>If you found this useful, share it with a fellow horse owner. The more of us testing rather than guessing, the better for our horses \u2014 and the longer our wormers will keep working.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>How to Know What&#8217;s Actually Going on Inside Your Horse \u2014 The Fecal Egg Count Explained In my last post I talked about worming horses out of habit \u2014 and why that calendar-based approach is something we really need to move away from. I promised to follow up with the [&hellip;]<\/p>\n","protected":false},"author":2,"featured_media":35787,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_thinkrank_schema_form_data":"","_thinkrank_selected_schema_type":"","_thinkrank_additional_schemas":"","_thinkrank_canonical_url":"","_thinkrank_og_title":"","_thinkrank_og_description":"","_thinkrank_og_image":"","_thinkrank_twitter_title":"","_thinkrank_twitter_description":"","_thinkrank_twitter_image":"","_thinkrank_imported_from":"yoast","_thinkrank_focus_keywords":["Fecal Egg Counts"],"_thinkrank_focus_keyword":"Fecal Egg Counts","_thinkrank_robots_meta_enabled":0,"_thinkrank_robots_meta":"","_thinkrank_advanced_robots_meta":"","_thinkrank_primary_category":449,"site-sidebar-layout":"default","site-content-layout":"","ast-site-content-layout":"default","site-content-style":"default","site-sidebar-style":"default","ast-global-header-display":"","ast-banner-title-visibility":"","ast-main-header-display":"","ast-hfb-above-header-display":"","ast-hfb-below-header-display":"","ast-hfb-mobile-header-display":"","site-post-title":"","ast-breadcrumbs-content":"","ast-featured-img":"","footer-sml-layout":"","ast-disable-related-posts":"","theme-transparent-header-meta":"default","adv-header-id-meta":"","stick-header-meta":"default","header-above-stick-meta":"","header-main-stick-meta":"","header-below-stick-meta":"","astra-migrate-meta-layouts":"set","ast-page-background-enabled":"default","ast-page-background-meta":{"desktop":{"background-color":"var(--ast-global-color-4)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"tablet":{"background-color":"","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"mobile":{"background-color":"","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""}},"ast-content-background-meta":{"desktop":{"background-color":"var(--ast-global-color-5)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"tablet":{"background-color":"var(--ast-global-color-5)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"mobile":{"background-color":"var(--ast-global-color-5)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""}},"footnotes":""},"categories":[101,449],"tags":[1795,317,1794],"class_list":["post-35783","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-health","category-horse-care","tag-fecal-egg-count","tag-worming","tag-worms"],"_links":{"self":[{"href":"https:\/\/naturalhorseworld.com\/stage\/wp-json\/wp\/v2\/posts\/35783","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/naturalhorseworld.com\/stage\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/naturalhorseworld.com\/stage\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/naturalhorseworld.com\/stage\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/naturalhorseworld.com\/stage\/wp-json\/wp\/v2\/comments?post=35783"}],"version-history":[{"count":0,"href":"https:\/\/naturalhorseworld.com\/stage\/wp-json\/wp\/v2\/posts\/35783\/revisions"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/naturalhorseworld.com\/stage\/wp-json\/wp\/v2\/media\/35787"}],"wp:attachment":[{"href":"https:\/\/naturalhorseworld.com\/stage\/wp-json\/wp\/v2\/media?parent=35783"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/naturalhorseworld.com\/stage\/wp-json\/wp\/v2\/categories?post=35783"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/naturalhorseworld.com\/stage\/wp-json\/wp\/v2\/tags?post=35783"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}